CDS
| Accession Number | TCMCG007C02780 |
| gbkey | CDS |
| Protein Id | XP_009107507.1 |
| Location | join(15849320..15850729,15850803..15851117) |
| Gene | LOC103833165 |
| GeneID | 103833165 |
| Organism | Brassica rapa |
Protein
| Length | 574aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009109259.2 |
| Definition | 2-hydroxyacyl-CoA lyase [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | EH |
| Description | Belongs to the TPP enzyme family |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12261
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04146
[VIEW IN KEGG] map04146 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGGATGACTCAGCAGCAGCCACTCCACCGTCAATCGACGGCAACGCCCTCGTCGCAAAATCCCTCTCCCATCTCGGCGTCACGCACATGTTCGGCGTCGTGGGAATCCCCGTCACCTCCCTCGCCACCCGAGCCATGGCTCTCGGCATCCGCTTCATCGCCTTCCACAACGAGCAGTCCGCCGGGTACGCCGCCTCCGCGTACGGCTACCTCACTGGCAAACCGGGAATCCTCCTCACCGTCTCGGGCCCGGGGTGCGTCCACGGCCTCGCGGGCCTCTCCAACGCCTGGGCTAACACCTGGCCGATGGTGATGATCTCCGGCTCGTGCGATCAGCGAGACGCAGGCCGCGGAGATTTTCAGGAGCTTGATCAGATCGAGGCTGTTAAAGCGTTCTCGAAGCTTTCGGAGAAGGCGAAGGACGTTCGCGAGATCCCCAATTGCGTTTCTAGGGTTTTGAATCGAGCCGGGTCGGGTCGACCCGGCGGGTGTTATCTGGATCTTCCCTCTGACGTGTTGCGTCAGAGGATCGTGGAGTCAGAGGGGGATGAGCTCGTGGCTAAAGTCGAGACCTTTAGTGATCACGTGCCGCAGGCACGTGCTTCTTTAAAATCGGAGATTGAATCTGCGGTTAACCTTCTGAGGAAGGCAGAGAGGCCGTTGATTGTGTTCGGTAAAGGAGCGGCTTATTCACGCGCGGAGGATGAGTTGAAGAAGCTCGTGGAGCTCACGGGGATACCTTTCCTCCCTACTCCGATGGGGAAAGGCTTGTTGCCGGATACGCACGAGCTTTCGGCGACGGCGGCGAGGTCGCTAGCTATTGGGAAATGCGACGTCGCTTTGGTGGTTGGAGCTAGGCTTAACTGGCTTCTCCACTTCGGAGAGGCTCCGAAATGGTCTAAAGACGTGAGCTTTGTGCTTGTTGATGTCTCTGAGGAGGAGATTGAGCTGAGGAAGCCTCGCTTGGGGATCGTCGGAGATGCTAAAACGGTGGTGGGTTTGTTGAACAGAGAGATAAAGGACGATCCTTTTTGTCTGGGGAAGACGAATCCGTGGGTGGAGGCGATCTCCAAGAAGGCGAGAGAGAACGGTGAGAAGATGGAGATGCAGCTTGCGAAAGATGTGGTTCCTTTCAACTTCTTGACTCCTATGAGGATCATCAGGGACGCGATTTTGGCGGTGGAAGGACCGAGTCCTGTTGTGGTGTCGGAAGGGGCTAACACGATGGATGTGGGGAGATCGGTTTTGGTTCAGAGAGAGCCGAGGACGAGGCTTGATGCAGGGACTTGGGGGACAATGGGTGTTGGTTTGGGTTATTGTATTGCTGCTGCTGTTGCTTGTCCTGATCGGCTTGTTGTTGCCGTTGAAGGTGACTCTGGTTTTGGATTCAGCGCCATGGAAGTTGAGACATTGGTTCGATACAGTCTTCCTGTGGTGGTGATTGTCTTCAACAACGGTGGTGTATATGGCGGTGACAGGAGGAGTCCTGAAGAGATCTCGGGTCCTCATAAAGAAGATCCAGCACCAACGTCGTTTGTTCCAAATGCAGGGTATCACAAGCTTATTGAAGCTTTTGGAGGCAAAGGGTATATAGTGGAAACGCCCGATGAGCTTAAGTCCGCTCTCTCTGAGTCGTTCGCTGCAAGAAAACCAGCGGTGGTTAATGTTATTATAGATCCTTTTGCTGGTGCTGAGAGTGGGAGGTTGCAGCACAAGAACTAG |
| Protein: MADDSAAATPPSIDGNALVAKSLSHLGVTHMFGVVGIPVTSLATRAMALGIRFIAFHNEQSAGYAASAYGYLTGKPGILLTVSGPGCVHGLAGLSNAWANTWPMVMISGSCDQRDAGRGDFQELDQIEAVKAFSKLSEKAKDVREIPNCVSRVLNRAGSGRPGGCYLDLPSDVLRQRIVESEGDELVAKVETFSDHVPQARASLKSEIESAVNLLRKAERPLIVFGKGAAYSRAEDELKKLVELTGIPFLPTPMGKGLLPDTHELSATAARSLAIGKCDVALVVGARLNWLLHFGEAPKWSKDVSFVLVDVSEEEIELRKPRLGIVGDAKTVVGLLNREIKDDPFCLGKTNPWVEAISKKARENGEKMEMQLAKDVVPFNFLTPMRIIRDAILAVEGPSPVVVSEGANTMDVGRSVLVQREPRTRLDAGTWGTMGVGLGYCIAAAVACPDRLVVAVEGDSGFGFSAMEVETLVRYSLPVVVIVFNNGGVYGGDRRSPEEISGPHKEDPAPTSFVPNAGYHKLIEAFGGKGYIVETPDELKSALSESFAARKPAVVNVIIDPFAGAESGRLQHKN |